PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_16669
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 84aa    MW: 9200.28 Da    PI: 10.4498
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_16669genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.7e-192474255
         AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                g +GVr ++ +g+++AeIrdp   + k  r++lg+f+ta eAa+a++ a+ +++g
  PEQU_16669 24 GSRGVRKRP-WGKFAAEIRDP---KrKGSRIWLGTFDTAVEAARAYDSAAFEMRG 74
                569******.**********8...4334*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103223.4062482IPR001471AP2/ERF domain
PfamPF008476.3E-142574IPR001471AP2/ERF domain
PRINTSPR003675.5E-102536IPR001471AP2/ERF domain
SuperFamilySSF541716.02E-232583IPR016177DNA-binding domain
SMARTSM003803.8E-322684IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.9E-322683IPR001471AP2/ERF domain
CDDcd000184.28E-272683No hitNo description
PRINTSPR003675.5E-104864IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 84 aa     Download sequence    Send to blast
IQPDPDSIRS TAGDTAAYGI DGRGSRGVRK RPWGKFAAEI RDPKRKGSRI WLGTFDTAVE  60
AARAYDSAAF EMRGSKAILN FPNE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A2e-272282363ATERF1
2gcc_A2e-272282363ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008786269.13e-32PREDICTED: ethylene-responsive transcription factor ERF105-like
SwissprotQ8VY902e-31EF105_ARATH; Ethylene-responsive transcription factor ERF105
SwissprotQ404788e-31ERF5_TOBAC; Ethylene-responsive transcription factor 5
SwissprotO803411e-30EF102_ARATH; Ethylene-responsive transcription factor 5
TrEMBLM0S6U02e-32M0S6U0_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr2P10490_0017e-32(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.11e-32ERF family protein